Protein ZmPHD22
ZmPHD22 is a protein in the PHD family.
Information
Coreg Name: ZmPHD22
Species: Maize
Coreg Family: PHD
Gene Name(Synonym): PHD22
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmPHD22

ZmPHD22 is a protein in the PHD family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00628
Zm00001eb252930_T002
Zm00001eb252930_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d017862DAPseq no logo sequence fimo position
Zm00001d017862DAPseq no logo sequence fimo position
Zm00001d017862ChIPseq no logo sequence fimo position
Zm00001d017862PChIPseq no logo sequence fimo position

Interactions where ZmPHD22 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmPHD22 is the target  
Expand


There are 100 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb252930_T002 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MGDAPAAAAAASPACAAQKRRRGDDGAGLRRVAEIVMVLAAAGEVRGGMEPTAAERALAAEARETLAAAVAEGAVRPKDL
FSVEAVRAVVEDLGLNRAKDPAAMGFRPPKASIADRLMLTKRKMEEVKEAPVQSTVSAPQTVVSSGMSDFHGLNGATKFG
VGVPRDPPVPSITASAPLTSTSPATLKPPESFPVKPVSNSSVVPVLYSGPSNLKSDKNVSGPLNLAHTGATVVHSNKSTV
DASARSSVNASNQMVKNQDTKPVTVQAMAGNPATGHRATPTFINHNEIAKNVQQFLHQPANNPSWTPPSTDYMHSRLSCQ
ICKVVIIGTDSLLVCDACERGVHLKCLQQYGNKGVPKAEWHCSACLTQSKGKPLPPKYGKVTRTVVASKAAPPGGGAQLS
LQGSAENMASKENHQKLAANGNLMKPISIQGGSTAPNSNVLALSAITAGSQSQLVSTLRPSRVVKAEMFSIGKEGTGQPC
NTTIQPAVRSSPLNKRLRSDSSLNPADSANDIMHGKYTTEISGAEAKVKSEVNYEASVSRDEELVDSSGTSIETEQTKVG
ASEEKPRTQSTFETDKVKDGGTTTNTGTATDQCSNFGTEENLPGEITSEAHKITDVKMTSNTGTSVQQSNIDSIEEKASQ
IDAVSDPHAHIIQDMGMDTNNGPPVAESGSPVAEEKPPEQSSSIGDVCVTANAGIPTDQTQHPNGSTENVVRKSPNRELY
EEKSGRL

MGDAPAAAAAASPACAAQKRRRGDDGAGLRRVAEIVMVLAAAGEVRGGMEPTAAERALAAEARETLAAAVAEGAVRPKDL
FSVEAVRAVVEDLGLNRAKDPAAMGFRPPKASIADRLMLTKRKMEEVKEAPVQSTVSAPQTVVSSGMSDFHGLNGATKFG
VGVPRDPPVPSITASAPLTSTSPATLKPPESFPVKPVSNSSVVPVLYSGPSNLKSDKNVSGPLNLAHTGATVVHSNKSTV
DASARSSVNASNQMVKNQDTKPVTVQAMAGNPATGHRATPTFINHNEIAKNVQQFLHQPANNPSWTPPSTDYMHSRLSCQ
ICKVVIIGTDSLLVCDACERGVHLKCLQQYGNKGVPKAEWHCSACLTQSKGKPLPPKYGKVTRTVVASKAAPPGGGAQLS
LQGSAENMASKENHQKLAANGNLMKPISIQGGSTAPNSNVLALSAITAGSQSQLVSTLRPSRVVKAEMFSIGKEGTGQPC
NTTIQPAVRSSPLNKRLRSDSSLNPADSANDIMHGKYTTEISGAEAKVKSEVNYEASVSRDEELVDSSGTSIETEQTKVG
ASEEKPRTQSTFETDKVKDGGTTTNTGTATDQCSNFGTEENLPGEITSEAHKITDVKMTSNTGTSVQQSNIDSIEEKASQ
IDAVSDPHAHIIQDMGMDTNNGPPVAESGSPVAEEKPPEQSSSIGDVCVTANAGIPTDQTQHPNGSTENVVRKSPNRELY
EEKSGRL

MGDAPAAAAAASPACAAQKRRRGDDGAGLRRVAEIVMVLAAAGEVRGGMEPTAAERALAAEARETLAAAVAEGAVRPKDL
FSVEAVRAVVEDLGLNRAKDPAAMGFRPPKASIADRLMLTKRKMEEVKEAPVQSTVSAPQTVVSSGMSDFHGLNGATKFG
VGVPRDPPVPSITASAPLTSTSPATLKPPESFPVKPVSNSSVVPVLYSGPSNLKSDKNVSGPLNLAHTGATVVHSNKSTV
DASARSSVNASNQMVKNQDTKPVTVQAMAGNPATGHRATPTFINHNEIAKNVQQFLHQPANNPSWTPPSTDYMHSRLSCQ
ICKVVIIGTDSLLVCDACERGVHLKCLQQYGNKGVPKAEWHCSACLTQSKGKPLPPKYGKVTRTVVASKAAPPGGGAQLS
LQGSAENMASKENHQKLAANGNLMKPISIQGGSTAPNSNVLALSAITAGSQSQLVSTLRPSRVVKAEMFSIGKEGTGQPC
NTTIQPAVRSSPLNKRLRSDSSLNPADSANDIMHGKYTTEISGAEAKVKSEVNYEASVSRDEELVDSSGTSIETEQTKVG
ASEEKPRTQSTFETDKVKDGGTTTNTGTATDQCSNFGTEENLPGEITSEAHKITDVKMTSNTGTSVQQSNIDSIEEKASQ
IDAVSDPHAHIIQDMGMDTNNGPPVAESGSPVAEEKPPEQSSSIGDVCVTANAGIPTDQTQHPNGSTENVVRKSPNRELY
EEKSGRL

MGDAPAAAAAASPACAAQKRRRGDDGAGLRRVAEIVMVLAAAGEVRGGMEPTAAERALAAEARETLAAAVAEGAVRPKDL
FSVEAVRAVVEDLGLNRAKDPAAMGFRPPKASIADRLMLTKRKMEEVKEAPVQSTVSAPQTVVSSGMSDFHGLNGATKFG
VGVPRDPPVPSITASAPLTSTSPATLKPPESFPVKPVSNSSVVPVLYSGPSNLKSDKNVSGPLNLAHTGATVVHSNKSTV
DASARSSVNASNQMVKNQDTKPVTVQAMAGNPATGHRATPTFINHNEIAKNVQQFLHQPANNPSWTPPSTDYMHSRLSCQ
ICKVVIIGTDSLLVCDACERGVHLKCLQQYGNKGVPKAEWHCSACLTQSKGKPLPPKYGKVTRTVVASKAAPPGGGAQLS
LQGSAENMASKENHQKLAANGNLMKPISIQGGSTAPNSNVLALSAITAGSQSQLVSTLRPSRVVKAEMFSIGKEGTGQPC
NTTIQPAVRSSPLNKRLRSDSSLNPADSANDIMHGKYTTEISGAEAKVKSEVNYEASVSRDEELVDSSGTSIETEQTKVG
ASEEKPRTQSTFETDKVKDGGTTTNTGTATDQCSNFGTEENLPGEITSEAHKITDVKMTSNTGTSVQQSNIDSIEEKASQ
IDAVSDPHAHIIQDMGMDTNNGPPVAESGSPVAEEKPPEQSSSIGDVCVTANAGIPTDQTQHPNGSTENVVRKSPNRELY
EEKSGRL

MGDAPAAAAAASPACAAQKRRRGDDGAGLRRVAEIVMVLAAAGEVRGGMEPTAAERALAAEARETLAAAVAEGAVRPKDL
FSVEAVRAVVEDLGLNRAKDPAAMGFRPPKASIADRLMLTKRKMEEVKEAPVQSTVSAPQTVVSSGMSDFHGLNGATKFG
VGVPRDPPVPSITASAPLTSTSPATLKPPESFPVKPVSNSSVVPVLYSGPSNLKSDKNVSGPLNLAHTGATVVHSNKSTV
DASARSSVNASNQMVKNQDTKPVTVQAMAGNPATGHRATPTFINHNEIAKNVQQFLHQPANNPSWTPPSTDYMHSRLSCQ
ICKVVIIGTDSLLVCDACERGVHLKCLQQYGNKGVPKAEWHCSACLTQSKGKPLPPKYGKVTRTVVASKAAPPGGGAQLS
LQGSAENMASKENHQKLAANGNLMKPISIQGGSTAPNSNVLALSAITAGSQSQLVSTLRPSRVVKAEMFSIGKEGTGQPC
NTTIQPAVRSSPLNKRLRSDSSLNPADSANDIMHGKYTTEISGAEAKVKSEVNYEASVSRDEELVDSSGTSIETEQTKVG
ASEEKPRTQSTFETDKVKDGGTTTNTGTATDQCSNFGTEENLPGEITSEAHKITDVKMTSNTGTSVQQSNIDSIEEKASQ
IDAVSDPHAHIIQDMGMDTNNGPPVAESGSPVAEEKPPEQSSSIGDVCVTANAGIPTDQTQHPNGSTENVVRKSPNRELY
EEKSGRL

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00628
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard
     
Expand

GCGACTATAATCCCCCTCATCGCCA...

GRMZM2G045544_T01 from maize genome v3


Related TFome: pUT4427

Amino Acid Sequence
Copy to clipboard

MGDAPAAAAAASPACAAQKRRRGDDGAGLRRVAEIVMVLAAAGEVRGGMEPTAAERALAAEARETLAAAVAEGAVRPKDL
FSVEAVRAVVEDLGLNRAKDPAAMGFRPPKASIADRLMLTKRKMEEVKEAPVQSTVSAPQTVVSSGMSDFHGLNGATKFG
VGVPRDPPVPSITASAPLTSTSPATLKPPESFPVKPVSNSSVVPVLYSGPSNLKSDKNVSGPLNLAHTGATVVHSNKSTV
DASARSSVNASNQMVKNQDTKPVTVQAMAGNPATGHRATPTFINHNEIAKNVQQFLHQPANNPSWTPPSTDYMHSRLSCQ
ICKVVIIGTDSLLVCDACERGVHLKCLQQYGNKGVPKAEWHCSACLTQSKGKPLPPKYGKVTRTVVASKAAPPGGGAQLS
LQGSAENMASKENHQKLAANGNLMKPISIQGGSTAPNSNVLALSAITAGSQSQLVSTLRPSRVVKAEMFSIGKEGTGQPC
NTTIQPAVRSSPLNKRLRSDSSLNPADSANDIMHGKYTTEISGAEAKVKSEVNYEASVSRDEELVDSSGTSIETEQTKVG
ASEEKPRTQSTFETDKVKDGGTTTNTGTATDQCSNFGTEENLPGEITSEAHKITDVKMTSNTGTSVQQSNIDSIEEKASQ
IDAVSDPHAHIIQDMGMDTNNGPPVAESGSPVAEEKPPEQSSSIGDVCVTANAGIPTDQTQHPNGSTENVVRKSPNRELY
EEKSGRL

Nucleotide Sequence
Copy to clipboard
     
Expand

CTACACCTGCGACTATAATCCCCCT...

GRMZM2G045544_T02 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MGDAPAAAAAASPACAAQKRRRGDDGAGLRRVAEIVMVLAAAGEVRGGMEPTAAERALAAEARETLAAAVAEGAVRPKDL
FSVEAVRAVVEDLGLNRAKDPAAMGFRPPKASIADRLMLTKRKMEEVKEAPVQSTVSAPQTVVSSGMSDFHGLNGATKFG
VGVPRDPPVPSITASAPLTSTSPATLKPPESFPVKPVSNSSVVPVLYSGPSNLKSDKNVSGPLNLAHTGATVVHSNKSTV
DASARSSVNASNQMVKNQDTKPVTVQAMAGNPATGHRATPTFINHNEIAKNVQQFLHQPANNPSWTPPSTDYMHSRLSCQ
ICKVVIIGTDSLLVCDACERGVHLKCLQQYGNKGVPKAEWHCSACLTQSKGKPLPPKYGKVTRTVVASKAAPPGGGAQLS
LQGSAENMASKENHQKLAANGNLMKPISIQGGSTAPNSNVLALSAITAGSQSQLVSTLRPSRVVKAEMFSIGKEGTGQPC
NTTIQPAVRSSPLNKRLRSDSSLNPADSANDIMHGKYTTEISGAEAKVKSEVNYEASVSRDEELVDSSGTSIETEQTKVG
ASEEKPRTQSTFETDKVKDGGTTTNTGTATDQCSNFGTEENLPGEITSEAHKITDVKMTSNTGTSVQQSNIDSIEEKASQ
IDAVSDPHAHIIQDMGMDTNNGPPVAESGSPVAEEKPPEQSSSIGDVCVTANAGIPTDQTQHPNGSTENVVRKSPNRELY
EEKSGRL

Nucleotide Sequence
Copy to clipboard
     
Expand

CTACACCTGCGACTATAATCCCCCT...

Zm00001d017862_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MGDAPAAAAAASPACAAQKRRRGDDGAGLRRVAEIVMVLAAAGEVRGGMEPTAAERALAAEARETLAAAVAEGAVRPKDL
FSVEAVRAVVEDLGLNRAKDPAAMGFRPPKASIADRLMLTKRKVLLTLSRLHPFPRTLLTIELVCLQLELSRMEEVKEAP
VQSTVSAPQTVVSSGMSDFHGLNGATKFGVGVPRDPPVPSITASAPLTSTSPATLKPPESFPVKPVSNSSVVPVLYSGPS
NLKSDKNVSGPLNLAHTGATVVHSNKSTVDASARSSVNASNQMVKNQDTKPVTVQAMAGNPATGHRATPTFINHNEIAKN
VQQFLHQPANNPSWTPPSTDYMHSRLSCQICKVVIIGTDSLLVCDACERGVHLKCLQQYGNKGVPKAEWHCSACLTQSKG
KPLPPKYGKVTRTVVASKAAPPGGGAQLSLQGSAENMASKENHQKLAANGNLMKPISIQGGSTAPNSNVLALSAITAGSQ
SQLVSTLRPSRVVKAEMFSIGKEGTGQPCNTTIQPAVRSSPLNKRLRSDSSLNPADSANDIMHGKYTTEISGAEAKVKSE
VNYEASVSRDEELVDSSGTSIETEQTKVGASEEKPRTQSTFETDKVKDGGTTTNTGTATDQCSNFGTEENLPGEITSEAH
KITDVKMTSNTGTSVQQSNIDSIEEKASQIDAVSDPHAHIIQDMGMDTNNGPPVAESGSPVAEEKPPEQSSSIGDVCVTA
NAGIPTDQTQHPNGSTENVVRKSPNRELYEEKSGRL

Nucleotide Sequence
Copy to clipboard
     
Expand

ATGGGGGACGCCCCCGCCGCCGCGG...

Zm00001d017862_T002 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MAGNPATGHRATPTFINHNEIAKNVQQFLHQPANNPSWTPPSTDYMHSRLSCQICKVVIIGTDSLLVCDACERGVHLKCL
QQYGNKGVPKAEWHCSACLTQSKGKPLPPKYGKVTRTVVASKAAPPGGGAQLSLQGSAENMASKENHQKLAANGNLMKPI
SIQGGSTAPNSNVLALSAITAGSQSQLVSTLRPSRVVKAEMFSIGKEGTGQPCNTTIQPAVRSSPLNKRLRSDSSLNPAD
SANDIMHGKYTTEISGAEAKVKSEVNYEASVSRDEELVDSSGTSIETEQTKVGASEEKPRTQSTFETDKVKDGGTTTNTG
TATDQCSNFGTEENLPGEITSEAHKITDVKMTSNTGTSVQQSNIDSIEEKASQIDAVSDPHAHIIQDMGMDTNNGPPVAE
SGSPVAEEKPPEQSSSIGDVCVTANAGIPTDQTQHPNGSTENVVRKSPNRELYEEKSGRL

Nucleotide Sequence
Copy to clipboard
     
Expand

AACCAGTGACAGTTCAAGCCATGGC...

Zm00001eb252930_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MGDAPAAAAAASPACAAQKRRRGDDGAGLRRVAEIVMVLAAAGEVRGGMEPTAAERALAAEARETLAAAVAEGAVRPKDL
FSVEAVRAVVEDLGLNRAKDPAAMGFRPPKASIADRLMLTKRKMEEVKEAPVQSTVSAPQTVVSSGMSDFHGLNGATKFG
VGVPRDPPVPSITASAPLTSTSPATLKPPESFPVKPVSNSSVVPVLYSGPSNLKSDKNVSGPLNLAHTGATVVHSNKSTV
DASARSSVNASNQMVKNQDTKPVTVQAMAGNPATGHRATPTFINHNEIAKNVQQFLHQPANNPSWTPPSTDYMHSRLSCQ
ICKVVIIGTDSLLVCDACERGVHLKCLQQYGNKGVPKAEWHCSACLTQSKGKPLPPKYGKVTRTVVASKAAPPGGGAQLS
LQGSAENMASKENHQKLAANGNLMKPISIQGGSTAPNSNVLALSAITAGSQSQLVSTLRPSRVVKAEMFSIGKEGTGQPC
NTTIQPAVRSSPLNKRLRSDSSLNPADSANDIMHGKYTTEISGAEAKVKSEVNYEASVSRDEELVDSSGTSIETEQTKVG
ASEEKPRTQSTFETDKVKDGGTTTNTGTATDQCSNFGTEENLPGEITSEAHKITDVKMTSNTGTSVQQSNIDSIEEKASQ
IDAVSDPHAHIIQDMGMDTNNGPPVAESGSPVAEEKPPEQSSSIGDVCVTANAGIPTDQTQHPNGSTENVVRKSPNRELY
EEKSGRL

Nucleotide Sequence
Copy to clipboard
     
Expand

GCGACTATAATCCCCCTCATCGCCA...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26